Academic Experience

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Academic

Education

2017/09 to 2021/07. Banchelor student, majored in Mathematics and Applied Mathematics, at the University of Chinese Academy of Sciences(UCAS).
2020/02 to 2020/06. Visiting student, majored in mathematics, at Ecole Polytechnique Federale de Lausanne(EPFL).
2021-03 till now. Intern student, at the Institute of AI Industry Research(AIR), Tsinghua University.
2021-09 till now. PhD student, majored in Probability and Statistics, at the Academy of Mathematics and Systems Science(AMSS), Chinese Academy of Sciences(CAS).

Publications

Google Scholar / Semantic Scholar / OpenReview / Research Gate

Sliced Denoising: A Physics-Informed Molecular Pre-Training Method
Yuyan Ni*, Shikun Feng*, Wei-Ying Ma, Zhi-Ming Ma, Yanyan Lan, *Equal Contribution
ICLR 2024
OpenReview

Self-supervised Pocket Pretraining via Protein Fragment-Surroundings Alignment
Bowen Gao, Yinjun Jia, Yuanle Mo, Yuyan Ni, Weiying Ma, Zhiming Ma, Yanyan Lan
ICLR 2024
Paper

Unified Molecular Modeling via Modality Blending
Qiying Yu, Yudi Zhang, Yuyan Ni, Shikun Feng, Yanyan Lan, Hao Zhou, Jingjing Liu
ICLR 2024
Paper

Fractional denoising for 3d molecular pre-training
Shikun Feng*, Yuyan Ni*, Yanyan Lan, Zhi-Ming Ma, Wei-Ying Ma, *Equal Contribution
ICML 2023
Paper / Poster / Talk_5min / Talk_15min

Elastic Information Bottleneck
Yuyan Ni, Yanyan Lan, Ao Liu, Zhiming Ma
Mathematics 10 (18), 3352, 2022
Paper